STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZTE3ATP-dependent RNA helicase DBP10. (906 aa)    
Predicted Functional Partners:
A0A1Y1ZTZ9
Nucleolar GTP-binding protein 2.
  
 0.988
A0A1Y1XX03
Cytosine-5--methyltransferase NCL1; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.981
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.971
A0A1Y1ZKS7
RRM domain-containing protein.
   
 
 0.970
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.958
A0A1Y1ZZR4
Ribosome assembly protein-like protein Noc2.
   
 
 0.956
A0A1Y1ZGR0
Nucleolar protein 14.
   
 0.955
A0A1Y1ZGN9
Brix domain-domain-containing protein.
   
 
 0.954
A0A1Y1YLQ9
Brix domain-domain-containing protein.
   
   0.947
A0A1Y1ZFR5
Sas10 C-terminal domain-domain-containing protein.
   
  0.944
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
Server load: low (22%) [HD]