A0A1Y1ZXZ2 protein (Clohesyomyces aquaticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1Y1ZXZ2

RING-type domain-containing protein. (362 aa)

Predicted Functional Partners:

A0A1Y1ZXL2

0.700

A0A1Y1YA41

0.696

A0A1Y1YAK4

0.696

A0A1Y1YQM6

0.696

A0A1Y1YWE6

0.696

A0A1Y1Z4B5

0.696

A0A1Y1Z5K7

0.696

A0A1Y1ZE55

0.696

A0A1Y1ZJN9

0.696

A0A1Y1ZME2

0.696

Your Current Organism:

Clohesyomyces aquaticus

NCBI taxonomy Id: 1231657
Other names: C. aquaticus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1Y1YA41	A0A1Y1ZXZ2	FAD-binding FR-type domain-containing protein.	RING-type domain-containing protein.	0.696
A0A1Y1YAK4	A0A1Y1ZXZ2	FAD-binding FR-type domain-containing protein.	RING-type domain-containing protein.	0.696
A0A1Y1YQM6	A0A1Y1ZXZ2	Uncharacterized protein.	RING-type domain-containing protein.	0.696
A0A1Y1YWE6	A0A1Y1Z5K7	Bifunctional cytochrome P450/NADPH--P450 reductase; In the N-terminal section; belongs to the cytochrome P450 family.	Bifunctional cytochrome P450/NADPH--P450 reductase; In the N-terminal section; belongs to the cytochrome P450 family.	0.460
A0A1Y1YWE6	A0A1Y1ZXZ2	Bifunctional cytochrome P450/NADPH--P450 reductase; In the N-terminal section; belongs to the cytochrome P450 family.	RING-type domain-containing protein.	0.696
A0A1Y1Z4B5	A0A1Y1ZXZ2	Sugar isomerase.	RING-type domain-containing protein.	0.696
A0A1Y1Z5K7	A0A1Y1YWE6	Bifunctional cytochrome P450/NADPH--P450 reductase; In the N-terminal section; belongs to the cytochrome P450 family.	Bifunctional cytochrome P450/NADPH--P450 reductase; In the N-terminal section; belongs to the cytochrome P450 family.	0.460
A0A1Y1Z5K7	A0A1Y1ZE55	Bifunctional cytochrome P450/NADPH--P450 reductase; In the N-terminal section; belongs to the cytochrome P450 family.	NAD_binding_1 domain-containing protein.	0.476
A0A1Y1Z5K7	A0A1Y1ZXZ2	Bifunctional cytochrome P450/NADPH--P450 reductase; In the N-terminal section; belongs to the cytochrome P450 family.	RING-type domain-containing protein.	0.696
A0A1Y1ZE55	A0A1Y1Z5K7	NAD_binding_1 domain-containing protein.	Bifunctional cytochrome P450/NADPH--P450 reductase; In the N-terminal section; belongs to the cytochrome P450 family.	0.476
A0A1Y1ZE55	A0A1Y1ZXZ2	NAD_binding_1 domain-containing protein.	RING-type domain-containing protein.	0.696
A0A1Y1ZJN9	A0A1Y1ZXZ2	Arabinanase/levansucrase/invertase; Belongs to the glycosyl hydrolase 43 family.	RING-type domain-containing protein.	0.696
A0A1Y1ZME2	A0A1Y1ZXZ2	Galactan 1,3-beta-galactosidase; Belongs to the glycosyl hydrolase 43 family.	RING-type domain-containing protein.	0.696
A0A1Y1ZXL2	A0A1Y1ZXZ2	Armadillo-type protein.	RING-type domain-containing protein.	0.700
A0A1Y1ZXZ2	A0A1Y1YA41	RING-type domain-containing protein.	FAD-binding FR-type domain-containing protein.	0.696
A0A1Y1ZXZ2	A0A1Y1YAK4	RING-type domain-containing protein.	FAD-binding FR-type domain-containing protein.	0.696
A0A1Y1ZXZ2	A0A1Y1YQM6	RING-type domain-containing protein.	Uncharacterized protein.	0.696
A0A1Y1ZXZ2	A0A1Y1YWE6	RING-type domain-containing protein.	Bifunctional cytochrome P450/NADPH--P450 reductase; In the N-terminal section; belongs to the cytochrome P450 family.	0.696
A0A1Y1ZXZ2	A0A1Y1Z4B5	RING-type domain-containing protein.	Sugar isomerase.	0.696
A0A1Y1ZXZ2	A0A1Y1Z5K7	RING-type domain-containing protein.	Bifunctional cytochrome P450/NADPH--P450 reductase; In the N-terminal section; belongs to the cytochrome P450 family.	0.696