STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2A040Uncharacterized protein. (1422 aa)    
Predicted Functional Partners:
A0A1Y2A726
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.994
A0A1Y1ZPR7
CRM1 C terminal-domain-containing protein.
    
 0.991
A0A1Y1Z0Z4
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
   
 0.988
A0A1Y1Y9I7
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
    
 0.987
A0A1Y1YVG5
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
    
 
 0.987
A0A1Y1ZKU4
WD40-repeat-containing domain protein.
    
 0.987
A0A1Y1ZX25
Nup93/Nic96-domain-containing protein.
    
 0.987
A0A1Y1ZVC3
Nsp1-like C-terminal region-domain-containing protein.
   
 0.986
A0A1Y2A628
Nucleoporin complex subunit 54-domain-containing protein.
    
 0.986
A0A1Y2AA73
Uncharacterized protein.
   
 0.985
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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