STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2A1X0DDHD domain-domain-containing protein. (1018 aa)    
Predicted Functional Partners:
A0A1Y1ZKY7
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.818
A0A1Y2A8E8
WD_REPEATS_REGION domain-containing protein.
    
 0.812
A0A1Y1YGR9
Uncharacterized protein.
   
 0.797
A0A1Y1ZC07
Sec13 protein-like protein; Belongs to the WD repeat SEC13 family.
    
 0.779
A0A1Y1YTJ9
COPII component protein.
     
 0.739
A0A1Y1ZJY0
Transport protein-like protein sec22; Belongs to the synaptobrevin family.
     
 0.712
A0A1Y1ZTZ0
Sec23/Sec24 family protein.
   
 
 0.694
A0A1Y1YEA2
Small COPII coat GTPase sar1.
     
 0.681
A0A1Y2A7K5
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
   
 
  0.660
A0A1Y1ZPT8
Uncharacterized protein.
 
      0.652
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.