STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2A292Transcription factor IIA, alpha/beta subunit. (396 aa)    
Predicted Functional Partners:
A0A1Y1ZHI1
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
 0.997
A0A1Y1ZK50
Transcription initiation factor-like protein iib.
   
 0.987
A0A1Y1YQL2
Transcription initiation factor IIF, beta subunit-domain-containing protein.
   
 0.986
A0A1Y1ZY95
HTH TFE/IIEalpha-type domain-containing protein.
    
 0.985
A0A1Y1ZRL3
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
    
 0.983
A0A1Y1XYJ0
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.982
A0A1Y1ZK60
C2H2-type domain-containing protein.
    
 0.982
A0A1Y1ZVR8
Uncharacterized protein.
    
 0.982
A0A1Y1Z8B5
Uncharacterized protein.
    
 0.981
A0A1Y1Y670
TFIIH basal transcription factor complex helicase-like protein XPB subunit.
    
 0.977
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.