STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2A5C4Transcriptional repressor rco-1. (578 aa)    
Predicted Functional Partners:
A0A1Y2A8D9
TPR_REGION domain-containing protein.
    
 0.931
A0A1Y1ZUU2
Aft1 HRA domain-domain-containing protein.
    
 0.857
A0A1Y2A269
WD40-repeat-containing domain protein.
    
0.799
A0A1Y1YN22
SPRY domain-containing protein.
    
 0.798
A0A1Y1YI00
Kinase-like domain-containing protein.
    
  0.778
A0A1Y1ZPG5
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
    
 0.758
A0A1Y1Y601
Uncharacterized protein.
    
 0.699
A0A1Y1YTG3
Histone H3; Belongs to the histone H3 family.
    
 0.679
A0A1Y2A506
Histone-fold-containing protein.
    
 0.679
A0A1Y2AB18
Amidase signature domain-containing protein.
    
 0.664
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.