STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2A8V2NAD-dependent epimerase/dehydratase-like protein. (316 aa)    
Predicted Functional Partners:
A0A1Y1YLN9
Pyridoxal phosphate-dependent transferase.
  
 
 0.832
A0A1Y1ZQ68
Histidine biosynthesis trifunctional protein.
    
  0.766
A0A1Y1YJ69
Threonine dehydratase.
   
 
 0.757
A0A1Y1ZWJ0
Pyridoxal phosphate-dependent transferase.
    
 0.751
A0A1Y1Y0Q5
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
   
 
 0.738
A0A1Y2AAJ9
40S ribosomal protein S29.
   
  0.732
A0A1Y2ABM2
40s ribosomal protein-like protein S15; Belongs to the universal ribosomal protein uS19 family.
   
  0.732
A0A1Y2A8E2
Uncharacterized protein.
   
  0.722
A0A1Y1ZMN9
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
  0.719
A0A1Y1ZQK2
40S ribosomal protein S3-like protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.706
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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