Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACO03467.1 | ACO04363.1 | PERMA_0008 | PERMA_0009 | Peptidase S16, lon domain protein; Identified by match to protein family HMM PF05362. | Conserved hypothetical protein. | 0.773 |
| ACO03467.1 | ACO04607.1 | PERMA_0008 | PERMA_0011 | Peptidase S16, lon domain protein; Identified by match to protein family HMM PF05362. | Conserved hypothetical protein; Identified by match to protein family HMM PF04784. | 0.479 |
| ACO03467.1 | purM | PERMA_0008 | PERMA_0012 | Peptidase S16, lon domain protein; Identified by match to protein family HMM PF05362. | Phosphoribosylformylglycinamidine cyclo-ligase; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878. | 0.452 |
| ACO03467.1 | purN | PERMA_0008 | PERMA_0010 | Peptidase S16, lon domain protein; Identified by match to protein family HMM PF05362. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.558 |
| ACO03672.1 | ACO04607.1 | PERMA_0014 | PERMA_0011 | ATP binding protein; Has nucleotide phosphatase activity towards ATP, GTP, CTP, TTP and UTP. May hydrolyze nucleoside diphosphates with lower efficiency; Belongs to the THEP1 NTPase family. | Conserved hypothetical protein; Identified by match to protein family HMM PF04784. | 0.522 |
| ACO03672.1 | purM | PERMA_0014 | PERMA_0012 | ATP binding protein; Has nucleotide phosphatase activity towards ATP, GTP, CTP, TTP and UTP. May hydrolyze nucleoside diphosphates with lower efficiency; Belongs to the THEP1 NTPase family. | Phosphoribosylformylglycinamidine cyclo-ligase; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878. | 0.556 |
| ACO03672.1 | purN | PERMA_0014 | PERMA_0010 | ATP binding protein; Has nucleotide phosphatase activity towards ATP, GTP, CTP, TTP and UTP. May hydrolyze nucleoside diphosphates with lower efficiency; Belongs to the THEP1 NTPase family. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.450 |
| ACO04363.1 | ACO03467.1 | PERMA_0009 | PERMA_0008 | Conserved hypothetical protein. | Peptidase S16, lon domain protein; Identified by match to protein family HMM PF05362. | 0.773 |
| ACO04363.1 | ACO04607.1 | PERMA_0009 | PERMA_0011 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF04784. | 0.557 |
| ACO04363.1 | purM | PERMA_0009 | PERMA_0012 | Conserved hypothetical protein. | Phosphoribosylformylglycinamidine cyclo-ligase; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878. | 0.452 |
| ACO04363.1 | purN | PERMA_0009 | PERMA_0010 | Conserved hypothetical protein. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.586 |
| ACO04607.1 | ACO03467.1 | PERMA_0011 | PERMA_0008 | Conserved hypothetical protein; Identified by match to protein family HMM PF04784. | Peptidase S16, lon domain protein; Identified by match to protein family HMM PF05362. | 0.479 |
| ACO04607.1 | ACO03672.1 | PERMA_0011 | PERMA_0014 | Conserved hypothetical protein; Identified by match to protein family HMM PF04784. | ATP binding protein; Has nucleotide phosphatase activity towards ATP, GTP, CTP, TTP and UTP. May hydrolyze nucleoside diphosphates with lower efficiency; Belongs to the THEP1 NTPase family. | 0.522 |
| ACO04607.1 | ACO04363.1 | PERMA_0011 | PERMA_0009 | Conserved hypothetical protein; Identified by match to protein family HMM PF04784. | Conserved hypothetical protein. | 0.557 |
| ACO04607.1 | purM | PERMA_0011 | PERMA_0012 | Conserved hypothetical protein; Identified by match to protein family HMM PF04784. | Phosphoribosylformylglycinamidine cyclo-ligase; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878. | 0.723 |
| ACO04607.1 | purN | PERMA_0011 | PERMA_0010 | Conserved hypothetical protein; Identified by match to protein family HMM PF04784. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.655 |
| purM | ACO03467.1 | PERMA_0012 | PERMA_0008 | Phosphoribosylformylglycinamidine cyclo-ligase; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878. | Peptidase S16, lon domain protein; Identified by match to protein family HMM PF05362. | 0.452 |
| purM | ACO03672.1 | PERMA_0012 | PERMA_0014 | Phosphoribosylformylglycinamidine cyclo-ligase; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878. | ATP binding protein; Has nucleotide phosphatase activity towards ATP, GTP, CTP, TTP and UTP. May hydrolyze nucleoside diphosphates with lower efficiency; Belongs to the THEP1 NTPase family. | 0.556 |
| purM | ACO04363.1 | PERMA_0012 | PERMA_0009 | Phosphoribosylformylglycinamidine cyclo-ligase; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878. | Conserved hypothetical protein. | 0.452 |
| purM | ACO04607.1 | PERMA_0012 | PERMA_0011 | Phosphoribosylformylglycinamidine cyclo-ligase; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878. | Conserved hypothetical protein; Identified by match to protein family HMM PF04784. | 0.723 |
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