Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACO03260.1 | ACO04317.1 | PERMA_0646 | PERMA_0651 | Methyl-accepting chemotaxis protein signaling domain protein; Identified by match to protein family HMM PF00015. | Conserved hypothetical protein; Identified by match to protein family HMM PF01904. | 0.443 |
| ACO03260.1 | bioD | PERMA_0646 | PERMA_0649 | Methyl-accepting chemotaxis protein signaling domain protein; Identified by match to protein family HMM PF00015. | Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.443 |
| ACO03260.1 | fabD | PERMA_0646 | PERMA_0648 | Methyl-accepting chemotaxis protein signaling domain protein; Identified by match to protein family HMM PF00015. | Malonyl CoA-acyl carrier protein transacylase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128. | 0.443 |
| ACO03260.1 | trpB-2 | PERMA_0646 | PERMA_0647 | Methyl-accepting chemotaxis protein signaling domain protein; Identified by match to protein family HMM PF00015. | Conserved hypothetical protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.598 |
| ACO03463.1 | ACO04317.1 | PERMA_1909 | PERMA_0651 | DNA polymerase beta family; Identified by match to protein family HMM PF02811. | Conserved hypothetical protein; Identified by match to protein family HMM PF01904. | 0.404 |
| ACO03463.1 | lig | PERMA_1909 | PERMA_1901 | DNA polymerase beta family; Identified by match to protein family HMM PF02811. | DNA ligase (Polydeoxyribonucleotide synthase [ATP])(Lig(Tk)); DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | 0.967 |
| ACO04317.1 | ACO03260.1 | PERMA_0651 | PERMA_0646 | Conserved hypothetical protein; Identified by match to protein family HMM PF01904. | Methyl-accepting chemotaxis protein signaling domain protein; Identified by match to protein family HMM PF00015. | 0.443 |
| ACO04317.1 | ACO03463.1 | PERMA_0651 | PERMA_1909 | Conserved hypothetical protein; Identified by match to protein family HMM PF01904. | DNA polymerase beta family; Identified by match to protein family HMM PF02811. | 0.404 |
| ACO04317.1 | bioD | PERMA_0651 | PERMA_0649 | Conserved hypothetical protein; Identified by match to protein family HMM PF01904. | Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.773 |
| ACO04317.1 | fabD | PERMA_0651 | PERMA_0648 | Conserved hypothetical protein; Identified by match to protein family HMM PF01904. | Malonyl CoA-acyl carrier protein transacylase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128. | 0.773 |
| ACO04317.1 | lig | PERMA_0651 | PERMA_1901 | Conserved hypothetical protein; Identified by match to protein family HMM PF01904. | DNA ligase (Polydeoxyribonucleotide synthase [ATP])(Lig(Tk)); DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | 0.573 |
| ACO04317.1 | trpB-2 | PERMA_0651 | PERMA_0647 | Conserved hypothetical protein; Identified by match to protein family HMM PF01904. | Conserved hypothetical protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.559 |
| bioD | ACO03260.1 | PERMA_0649 | PERMA_0646 | Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | Methyl-accepting chemotaxis protein signaling domain protein; Identified by match to protein family HMM PF00015. | 0.443 |
| bioD | ACO04317.1 | PERMA_0649 | PERMA_0651 | Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | Conserved hypothetical protein; Identified by match to protein family HMM PF01904. | 0.773 |
| bioD | fabD | PERMA_0649 | PERMA_0648 | Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | Malonyl CoA-acyl carrier protein transacylase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128. | 0.823 |
| bioD | trpB-2 | PERMA_0649 | PERMA_0647 | Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | Conserved hypothetical protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.559 |
| fabD | ACO03260.1 | PERMA_0648 | PERMA_0646 | Malonyl CoA-acyl carrier protein transacylase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128. | Methyl-accepting chemotaxis protein signaling domain protein; Identified by match to protein family HMM PF00015. | 0.443 |
| fabD | ACO04317.1 | PERMA_0648 | PERMA_0651 | Malonyl CoA-acyl carrier protein transacylase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128. | Conserved hypothetical protein; Identified by match to protein family HMM PF01904. | 0.773 |
| fabD | bioD | PERMA_0648 | PERMA_0649 | Malonyl CoA-acyl carrier protein transacylase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128. | Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.823 |
| fabD | trpB-2 | PERMA_0648 | PERMA_0647 | Malonyl CoA-acyl carrier protein transacylase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128. | Conserved hypothetical protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.559 |
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