Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACO04566.1Multidrug-efflux transporter, MFS family; Identified by match to protein family HMM PF00529. (375 aa)    
Predicted Functional Partners:
ACO03692.1
Major facilitator family transporter; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily.
 
   0.961
ACO03873.1
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
 
   0.951
ACO03148.1
Multidrug ABC transporter; Identified by match to protein family HMM PF01061.
 
  
 0.879
ACO04410.1
Multidrug ABC transporter; Identified by match to protein family HMM PF00005.
 
    0.871
ACO04772.1
Multidrug ABC transporter, permease; Identified by match to protein family HMM PF01061.
 
  
 0.858
ACO03640.1
Efflux system, membrane fusion protein; Identified by match to protein family HMM PF00529.
 
    
0.835
ACO03984.1
Transcriptional regulator; Identified by match to protein family HMM PF00440.
 
     0.831
ACO03298.1
MscS Mechanosensitive ion channel; Identified by match to protein family HMM PF00924.
       0.773
ACO03141.1
Arsenate reductase (thioredoxin); Identified by match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.767
ACO04419.1
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
 
   0.739
Your Current Organism:
Persephonella marina
NCBI taxonomy Id: 123214
Other names: P. marina EX-H1, Persephonella marina EX-H1, Persephonella marina str. EX-H1, Persephonella marina strain EX-H1, bacterium EX-H1
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