Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACO03051.1 | ACO03827.1 | PERMA_1928 | PERMA_0937 | Conserved hypothetical protein. | PKD domain protein; Identified by match to protein family HMM PF00801. | 0.772 |
| ACO03243.1 | ACO03827.1 | PERMA_0935 | PERMA_0937 | Identified by match to protein family HMM PF00149. | PKD domain protein; Identified by match to protein family HMM PF00801. | 0.778 |
| ACO03243.1 | rsgA | PERMA_0935 | PERMA_0939 | Identified by match to protein family HMM PF00149. | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.558 |
| ACO03827.1 | ACO03051.1 | PERMA_0937 | PERMA_1928 | PKD domain protein; Identified by match to protein family HMM PF00801. | Conserved hypothetical protein. | 0.772 |
| ACO03827.1 | ACO03243.1 | PERMA_0937 | PERMA_0935 | PKD domain protein; Identified by match to protein family HMM PF00801. | Identified by match to protein family HMM PF00149. | 0.778 |
| ACO03827.1 | ACO04168.1 | PERMA_0937 | PERMA_0821 | PKD domain protein; Identified by match to protein family HMM PF00801. | Serine protease; Identified by match to protein family HMM PF00082; Belongs to the peptidase S8 family. | 0.782 |
| ACO03827.1 | acpP | PERMA_0937 | PERMA_0508 | PKD domain protein; Identified by match to protein family HMM PF00801. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.687 |
| ACO03827.1 | ctpA | PERMA_0937 | PERMA_0187 | PKD domain protein; Identified by match to protein family HMM PF00801. | Carboxy- peptidase; Identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family. | 0.548 |
| ACO03827.1 | rsgA | PERMA_0937 | PERMA_0939 | PKD domain protein; Identified by match to protein family HMM PF00801. | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.558 |
| ACO04168.1 | ACO03827.1 | PERMA_0821 | PERMA_0937 | Serine protease; Identified by match to protein family HMM PF00082; Belongs to the peptidase S8 family. | PKD domain protein; Identified by match to protein family HMM PF00801. | 0.782 |
| acpP | ACO03827.1 | PERMA_0508 | PERMA_0937 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | PKD domain protein; Identified by match to protein family HMM PF00801. | 0.687 |
| ctpA | ACO03827.1 | PERMA_0187 | PERMA_0937 | Carboxy- peptidase; Identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family. | PKD domain protein; Identified by match to protein family HMM PF00801. | 0.548 |
| rsgA | ACO03243.1 | PERMA_0939 | PERMA_0935 | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Identified by match to protein family HMM PF00149. | 0.558 |
| rsgA | ACO03827.1 | PERMA_0939 | PERMA_0937 | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | PKD domain protein; Identified by match to protein family HMM PF00801. | 0.558 |