Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACO03009.1 | ACO03019.1 | PERMA_0976 | PERMA_0971 | Prokaryotic N- methylation site; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719. | 0.536 |
| ACO03009.1 | ACO03539.1 | PERMA_0976 | PERMA_0972 | Prokaryotic N- methylation site; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | Putative pilus; Identified by match to protein family HMM PF00263; Belongs to the bacterial secretin family. | 0.805 |
| ACO03009.1 | ACO03712.1 | PERMA_0976 | PERMA_0974 | Prokaryotic N- methylation site; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | Hypothetical protein; Identified by Glimmer3; putative. | 0.536 |
| ACO03009.1 | ACO03867.1 | PERMA_0976 | PERMA_0970 | Prokaryotic N- methylation site; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | 0.862 |
| ACO03009.1 | ACO04685.1 | PERMA_0976 | PERMA_0973 | Prokaryotic N- methylation site; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | Hypothetical protein; Identified by Glimmer3; putative. | 0.536 |
| ACO03009.1 | ACO04884.1 | PERMA_0976 | PERMA_0975 | Prokaryotic N- methylation site; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | Hypothetical protein; Identified by Glimmer3; putative. | 0.536 |
| ACO03019.1 | ACO03009.1 | PERMA_0971 | PERMA_0976 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719. | Prokaryotic N- methylation site; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | 0.536 |
| ACO03019.1 | ACO03539.1 | PERMA_0971 | PERMA_0972 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719. | Putative pilus; Identified by match to protein family HMM PF00263; Belongs to the bacterial secretin family. | 0.773 |
| ACO03019.1 | ACO03712.1 | PERMA_0971 | PERMA_0974 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719. | Hypothetical protein; Identified by Glimmer3; putative. | 0.773 |
| ACO03019.1 | ACO03867.1 | PERMA_0971 | PERMA_0970 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719. | Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | 0.773 |
| ACO03019.1 | ACO04685.1 | PERMA_0971 | PERMA_0973 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719. | Hypothetical protein; Identified by Glimmer3; putative. | 0.773 |
| ACO03019.1 | ACO04884.1 | PERMA_0971 | PERMA_0975 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719. | Hypothetical protein; Identified by Glimmer3; putative. | 0.773 |
| ACO03539.1 | ACO03009.1 | PERMA_0972 | PERMA_0976 | Putative pilus; Identified by match to protein family HMM PF00263; Belongs to the bacterial secretin family. | Prokaryotic N- methylation site; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | 0.805 |
| ACO03539.1 | ACO03019.1 | PERMA_0972 | PERMA_0971 | Putative pilus; Identified by match to protein family HMM PF00263; Belongs to the bacterial secretin family. | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719. | 0.773 |
| ACO03539.1 | ACO03712.1 | PERMA_0972 | PERMA_0974 | Putative pilus; Identified by match to protein family HMM PF00263; Belongs to the bacterial secretin family. | Hypothetical protein; Identified by Glimmer3; putative. | 0.773 |
| ACO03539.1 | ACO03867.1 | PERMA_0972 | PERMA_0970 | Putative pilus; Identified by match to protein family HMM PF00263; Belongs to the bacterial secretin family. | Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | 0.857 |
| ACO03539.1 | ACO04685.1 | PERMA_0972 | PERMA_0973 | Putative pilus; Identified by match to protein family HMM PF00263; Belongs to the bacterial secretin family. | Hypothetical protein; Identified by Glimmer3; putative. | 0.773 |
| ACO03539.1 | ACO04884.1 | PERMA_0972 | PERMA_0975 | Putative pilus; Identified by match to protein family HMM PF00263; Belongs to the bacterial secretin family. | Hypothetical protein; Identified by Glimmer3; putative. | 0.773 |
| ACO03712.1 | ACO03009.1 | PERMA_0974 | PERMA_0976 | Hypothetical protein; Identified by Glimmer3; putative. | Prokaryotic N- methylation site; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | 0.536 |
| ACO03712.1 | ACO03019.1 | PERMA_0974 | PERMA_0971 | Hypothetical protein; Identified by Glimmer3; putative. | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719. | 0.773 |
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