STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACO03209.12-oxoglutarate ferredoxin oxidoreductase alpha subunit; Identified by match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR03710. (600 aa)    
Predicted Functional Partners:
ACO03514.1
Pyruvate ferredoxin oxidoreductase beta subunit; Identified by match to protein family HMM PF02775.
 
 0.999
orB
Alpha oxoglutarate ferredoxin oxidoreductase, beta subunit; Identified by match to protein family HMM PF02775; match to protein family HMM TIGR02177.
 0.999
ACO03789.1
Pyruvate ferredoxin oxidoreductase delta subunit; Identified by match to protein family HMM PF00037; match to protein family HMM TIGR02179.
  
 0.991
ACO03230.1
Pyruvate ferredoxin oxidoreductase alpha subunit; Identified by match to protein family HMM PF01855.
 
0.985
ACO03053.1
Pyruvate/ketoisovalerate oxidoreductases common subunit gamma; Identified by match to protein family HMM PF01558; match to protein family HMM TIGR02175.
  
 0.982
ACO04434.1
Isocitrate dehydrogenase, NADP-dependent; Identified by match to protein family HMM PF03971; match to protein family HMM TIGR00178; Belongs to the monomeric-type IDH family.
  
 
 0.982
sucD
succinate-CoA ligase, alpha subunit subfamily; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
 
 0.975
sucC
succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein 63) (VEG63); Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
  
 
 0.972
ACO04502.1
ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(Citrate cleavage enzyme); Identified by match to protein family HMM PF00549.
  
 
 0.955
ACO03829.1
ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(Citrate cleavage enzyme).
  
 
 0.950
Your Current Organism:
Persephonella marina
NCBI taxonomy Id: 123214
Other names: P. marina EX-H1, Persephonella marina EX-H1, Persephonella marina str. EX-H1, Persephonella marina strain EX-H1, bacterium EX-H1
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