Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACO02993.1 | ACO03035.1 | PERMA_1448 | PERMA_1453 | Cytochrome c family protein. | Cytochrome c family protein. | 0.756 |
ACO02993.1 | ACO03592.1 | PERMA_1448 | PERMA_1450 | Cytochrome c family protein. | Hypothetical protein; Identified by Glimmer3; putative. | 0.762 |
ACO02993.1 | ACO03597.1 | PERMA_1448 | PERMA_1455 | Cytochrome c family protein. | Cytochrome c family protein. | 0.756 |
ACO02993.1 | ACO03924.1 | PERMA_1448 | PERMA_1452 | Cytochrome c family protein. | NHL repeat domain protein; Identified by match to protein family HMM PF01436. | 0.756 |
ACO02993.1 | ACO03986.1 | PERMA_1448 | PERMA_1454 | Cytochrome c family protein. | NHL repeat protein; Identified by match to protein family HMM PF01436. | 0.756 |
ACO02993.1 | ACO04191.1 | PERMA_1448 | PERMA_1446 | Cytochrome c family protein. | Cytochrome c552. | 0.773 |
ACO02993.1 | ACO04320.1 | PERMA_1448 | PERMA_1456 | Cytochrome c family protein. | Identified by match to protein family HMM PF09699; match to protein family HMM TIGR01905. | 0.605 |
ACO02993.1 | ACO04444.1 | PERMA_1448 | PERMA_1447 | Cytochrome c family protein. | Conserved hypothetical protein. | 0.773 |
ACO02993.1 | ACO04495.1 | PERMA_1448 | PERMA_1449 | Cytochrome c family protein. | NHL repeat containing protein; Identified by match to protein family HMM PF01436; match to protein family HMM PF08450. | 0.773 |
ACO02993.1 | ACO04786.1 | PERMA_1448 | PERMA_1451 | Cytochrome c family protein. | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | 0.756 |
ACO03035.1 | ACO02993.1 | PERMA_1453 | PERMA_1448 | Cytochrome c family protein. | Cytochrome c family protein. | 0.756 |
ACO03035.1 | ACO03592.1 | PERMA_1453 | PERMA_1450 | Cytochrome c family protein. | Hypothetical protein; Identified by Glimmer3; putative. | 0.768 |
ACO03035.1 | ACO03597.1 | PERMA_1453 | PERMA_1455 | Cytochrome c family protein. | Cytochrome c family protein. | 0.773 |
ACO03035.1 | ACO03924.1 | PERMA_1453 | PERMA_1452 | Cytochrome c family protein. | NHL repeat domain protein; Identified by match to protein family HMM PF01436. | 0.773 |
ACO03035.1 | ACO03986.1 | PERMA_1453 | PERMA_1454 | Cytochrome c family protein. | NHL repeat protein; Identified by match to protein family HMM PF01436. | 0.773 |
ACO03035.1 | ACO04191.1 | PERMA_1453 | PERMA_1446 | Cytochrome c family protein. | Cytochrome c552. | 0.756 |
ACO03035.1 | ACO04320.1 | PERMA_1453 | PERMA_1456 | Cytochrome c family protein. | Identified by match to protein family HMM PF09699; match to protein family HMM TIGR01905. | 0.610 |
ACO03035.1 | ACO04444.1 | PERMA_1453 | PERMA_1447 | Cytochrome c family protein. | Conserved hypothetical protein. | 0.756 |
ACO03035.1 | ACO04495.1 | PERMA_1453 | PERMA_1449 | Cytochrome c family protein. | NHL repeat containing protein; Identified by match to protein family HMM PF01436; match to protein family HMM PF08450. | 0.756 |
ACO03035.1 | ACO04786.1 | PERMA_1453 | PERMA_1451 | Cytochrome c family protein. | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | 0.773 |
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