Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACO03100.1 | ACO03545.1 | PERMA_1852 | PERMA_1850 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Acylphosphatase; Identified by match to protein family HMM PF00708. | 0.647 |
| ACO03100.1 | ACO03960.1 | PERMA_1852 | PERMA_1855 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Hypothetical protein; Identified by Glimmer3; putative. | 0.773 |
| ACO03100.1 | ACO03962.1 | PERMA_1852 | PERMA_1851 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Lipoprotein; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551. | 0.639 |
| ACO03100.1 | ACO04404.1 | PERMA_1852 | PERMA_1853 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | ABC transporter; Identified by match to protein family HMM PF00005. | 0.773 |
| ACO03100.1 | ACO04682.1 | PERMA_1852 | PERMA_1847 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Conserved hypothetical protein; Identified by match to protein family HMM PF02578; similar to protein aq_167. | 0.553 |
| ACO03100.1 | accD | PERMA_1852 | PERMA_1848 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.553 |
| ACO03100.1 | bioW | PERMA_1852 | PERMA_1854 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | 6-carboxyhexanoate--CoA ligase; Catalyzes the transformation of pimelate into pimeloyl-CoA with concomitant hydrolysis of ATP to AMP. | 0.773 |
| ACO03100.1 | hisD | PERMA_1852 | PERMA_1846 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.469 |
| ACO03100.1 | mobB | PERMA_1852 | PERMA_1849 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Molybdopterin-guanine dinucleotide biosynthesis protein B; Identified by match to protein family HMM PF03205; match to protein family HMM TIGR00176. | 0.554 |
| ACO03545.1 | ACO03100.1 | PERMA_1850 | PERMA_1852 | Acylphosphatase; Identified by match to protein family HMM PF00708. | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | 0.647 |
| ACO03545.1 | ACO03960.1 | PERMA_1850 | PERMA_1855 | Acylphosphatase; Identified by match to protein family HMM PF00708. | Hypothetical protein; Identified by Glimmer3; putative. | 0.639 |
| ACO03545.1 | ACO03962.1 | PERMA_1850 | PERMA_1851 | Acylphosphatase; Identified by match to protein family HMM PF00708. | Lipoprotein; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551. | 0.807 |
| ACO03545.1 | ACO04404.1 | PERMA_1850 | PERMA_1853 | Acylphosphatase; Identified by match to protein family HMM PF00708. | ABC transporter; Identified by match to protein family HMM PF00005. | 0.639 |
| ACO03545.1 | ACO04682.1 | PERMA_1850 | PERMA_1847 | Acylphosphatase; Identified by match to protein family HMM PF00708. | Conserved hypothetical protein; Identified by match to protein family HMM PF02578; similar to protein aq_167. | 0.700 |
| ACO03545.1 | accD | PERMA_1850 | PERMA_1848 | Acylphosphatase; Identified by match to protein family HMM PF00708. | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.700 |
| ACO03545.1 | bioW | PERMA_1850 | PERMA_1854 | Acylphosphatase; Identified by match to protein family HMM PF00708. | 6-carboxyhexanoate--CoA ligase; Catalyzes the transformation of pimelate into pimeloyl-CoA with concomitant hydrolysis of ATP to AMP. | 0.639 |
| ACO03545.1 | hisD | PERMA_1850 | PERMA_1846 | Acylphosphatase; Identified by match to protein family HMM PF00708. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.569 |
| ACO03545.1 | mobB | PERMA_1850 | PERMA_1849 | Acylphosphatase; Identified by match to protein family HMM PF00708. | Molybdopterin-guanine dinucleotide biosynthesis protein B; Identified by match to protein family HMM PF03205; match to protein family HMM TIGR00176. | 0.667 |
| ACO03960.1 | ACO03100.1 | PERMA_1855 | PERMA_1852 | Hypothetical protein; Identified by Glimmer3; putative. | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | 0.773 |
| ACO03960.1 | ACO03545.1 | PERMA_1855 | PERMA_1850 | Hypothetical protein; Identified by Glimmer3; putative. | Acylphosphatase; Identified by match to protein family HMM PF00708. | 0.639 |
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