ACO04277.1 protein (Persephonella marina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ACO04277.1

Putative membrane protein. (396 aa)

Predicted Functional Partners:

ACO03843.1

0.773

ACO04557.1

0.773

ACO03677.1

0.773

galE

0.548

Your Current Organism:

Persephonella marina

NCBI taxonomy Id: 123214
Other names: P. marina EX-H1, Persephonella marina EX-H1, Persephonella marina str. EX-H1, Persephonella marina strain EX-H1, bacterium EX-H1

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACO03677.1	ACO03843.1	PERMA_2010	PERMA_2008	Beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	Putative undecaprenyl-phosphate galactosephosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.	0.773
ACO03677.1	ACO04277.1	PERMA_2010	PERMA_2011	Beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	Putative membrane protein.	0.773
ACO03677.1	ACO04557.1	PERMA_2010	PERMA_2009	Beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	Putative membrane protein.	0.773
ACO03677.1	galE	PERMA_2010	PERMA_2007	Beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	UDP-glucose 4-epimerase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.548
ACO03843.1	ACO03677.1	PERMA_2008	PERMA_2010	Putative undecaprenyl-phosphate galactosephosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.	Beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	0.773
ACO03843.1	ACO04277.1	PERMA_2008	PERMA_2011	Putative undecaprenyl-phosphate galactosephosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.	Putative membrane protein.	0.773
ACO03843.1	ACO04557.1	PERMA_2008	PERMA_2009	Putative undecaprenyl-phosphate galactosephosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.	Putative membrane protein.	0.808
ACO03843.1	galE	PERMA_2008	PERMA_2007	Putative undecaprenyl-phosphate galactosephosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.	UDP-glucose 4-epimerase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.808
ACO04277.1	ACO03677.1	PERMA_2011	PERMA_2010	Putative membrane protein.	Beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	0.773
ACO04277.1	ACO03843.1	PERMA_2011	PERMA_2008	Putative membrane protein.	Putative undecaprenyl-phosphate galactosephosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.	0.773
ACO04277.1	ACO04557.1	PERMA_2011	PERMA_2009	Putative membrane protein.	Putative membrane protein.	0.773
ACO04277.1	galE	PERMA_2011	PERMA_2007	Putative membrane protein.	UDP-glucose 4-epimerase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.548
ACO04557.1	ACO03677.1	PERMA_2009	PERMA_2010	Putative membrane protein.	Beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	0.773
ACO04557.1	ACO03843.1	PERMA_2009	PERMA_2008	Putative membrane protein.	Putative undecaprenyl-phosphate galactosephosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.	0.808
ACO04557.1	ACO04277.1	PERMA_2009	PERMA_2011	Putative membrane protein.	Putative membrane protein.	0.773
ACO04557.1	galE	PERMA_2009	PERMA_2007	Putative membrane protein.	UDP-glucose 4-epimerase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.565
galE	ACO03677.1	PERMA_2007	PERMA_2010	UDP-glucose 4-epimerase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	Beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	0.548
galE	ACO03843.1	PERMA_2007	PERMA_2008	UDP-glucose 4-epimerase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	Putative undecaprenyl-phosphate galactosephosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.	0.808
galE	ACO04277.1	PERMA_2007	PERMA_2011	UDP-glucose 4-epimerase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	Putative membrane protein.	0.548
galE	ACO04557.1	PERMA_2007	PERMA_2009	UDP-glucose 4-epimerase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	Putative membrane protein.	0.565

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Textmining

Co-occurrence

Experiments

Fusion

Databases

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About