STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000455245_00681Unannotated protein. (342 aa)    
Predicted Functional Partners:
GCA_000455245_00079
Unannotated protein.
  
 0.977
GCA_000455245_02091
Unannotated protein.
  
 
 0.968
GCA_000455245_00680
Unannotated protein.
    0.959
GCA_000455245_00682
Unannotated protein.
 
  
 
0.956
GCA_000455245_01305
Unannotated protein.
     
 0.917
GCA_000455245_01158
Unannotated protein.
   
 
 0.915
GCA_000455245_01156
Unannotated protein.
   
 
 0.908
GCA_000455245_00707
Unannotated protein.
    
 0.906
GCA_000455245_02056
Unannotated protein.
   
 
 0.894
GCA_000455245_00520
Unannotated protein.
  
 
 0.828
Your Current Organism:
Nesterenkonia massiliensis
NCBI taxonomy Id: 1232429
Other names: CSUR P244, DSM 26221, N. massiliensis, Nesterenkonia massiliensis Edouard et al. 2016, Nesterenkonia sp. NP1, strain NP1
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