STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001368795_02443Unannotated protein. (556 aa)    
Predicted Functional Partners:
GCA_001368795_05128
Unannotated protein.
  
 0.975
GCA_001368795_05135
Unannotated protein.
  
 0.975
GCA_001368795_06261
Unannotated protein.
  
  0.974
GCA_001368795_04340
Unannotated protein.
   
 0.959
GCA_001368795_01520
Unannotated protein.
 
 
0.953
GCA_001368795_02439
Unannotated protein.
  
 
0.951
GCA_001368795_02430
Unannotated protein.
    0.948
GCA_001368795_00733
Unannotated protein.
   
 0.934
GCA_001368795_01081
Unannotated protein.
   
 0.934
GCA_001368795_02250
Unannotated protein.
   
 0.934
Your Current Organism:
Paenibacillus ihuae
NCBI taxonomy Id: 1232431
Other names: CSUR P892, P. ihuae, Paenibacillus sp. GD6, strain GD6
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.