STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000508985_02420Unannotated protein. (333 aa)    
Predicted Functional Partners:
GCA_000508985_02421
Unannotated protein.
       0.737
GCA_000508985_02418
Unannotated protein.
       0.615
GCA_000508985_02419
Unannotated protein.
       0.615
GCA_000508985_00415
Unannotated protein.
  
     0.558
GCA_000508985_01416
Unannotated protein.
  
     0.507
GCA_000508985_00411
Unannotated protein.
  
     0.505
GCA_000508985_00063
Unannotated protein.
  
     0.495
GCA_000508985_00848
Unannotated protein.
  
     0.472
GCA_000508985_02422
Unannotated protein.
       0.469
GCA_000508985_02423
Unannotated protein.
       0.457
Your Current Organism:
Clostridiales bacterium VE20209
NCBI taxonomy Id: 1232447
Other names: C. bacterium VE202-09, Clostridiales bacterium VE202-09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.