STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000309825_00600Unannotated protein. (178 aa)    
Predicted Functional Partners:
FDF08_10260
Unannotated protein.
     0.994
rfbB
Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.921
galU
Unannotated protein.
  
 0.861
rfbA
Unannotated protein; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.851
FDF08_12035
Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
 
 0.825
GCA_000309825_01765
Unannotated protein.
  
 
 0.825
FDF08_06060
Unannotated protein.
  
 0.818
galE
Unannotated protein.
  
 
 0.764
FDF08_12485
Unannotated protein.
 
 
 0.755
FDF08_01805
Unannotated protein.
    
  0.650
Your Current Organism:
Micrococcus luteus modasa
NCBI taxonomy Id: 1232675
Other names: M. luteus str. modasa, Micrococcus luteus str. modasa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.