STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADIS_1029Putative lipoprotein. (231 aa)    
Predicted Functional Partners:
ADIS_1179
Hypothetical protein.
 
     0.788
ADIS_1178
Hypothetical protein.
  
     0.773
ADIS_3935
Putative protein involved in capsular polysaccharide biosynthesis.
  
     0.766
ADIS_2556
Hypothetical protein.
  
     0.707
ADIS_4787
Hypothetical protein.
  
     0.691
ADIS_2583
Glucose dehydrogenase, PQQ-dependent.
  
  0.685
ADIS_4399
Glutamate synthase [NADPH] large chain.
    
  0.681
ADIS_0501
Hypothetical protein.
  
     0.680
ADIS_3520
Copper-containing nitrite reductase.
  
  0.672
ADIS_3934
Hypothetical protein.
  
     0.670
Your Current Organism:
Lunatimonas lonarensis
NCBI taxonomy Id: 1232681
Other names: Aquiflexum sp. AK24, Aquiflexum sp. AK26, Cyclobacteriaceae bacterium AK24, JCM 18822, L. lonarensis, Lunatimonas lonarensis Srinivas et al. 2015, MTCC 11627, strain AK24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.