STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADIS_4714Putative endo-1,4-beta-xylanase. (433 aa)    
Predicted Functional Partners:
ADIS_4713
Putative dehydrogenase.
       0.773
ADIS_3731
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.690
ADIS_0391
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.688
ADIS_1249
Putative large secreted protein.
  
     0.663
ADIS_4715
Glucose dehydrogenase, PQQ-dependent.
       0.648
ADIS_2702
Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
 
   
 0.647
ADIS_3574
Hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.643
ADIS_4268
Beta-glucosidase.
  
  
 0.552
ADIS_1441
Putative cytochrome c precursor.
     
 0.545
ADIS_4391
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 0.508
Your Current Organism:
Lunatimonas lonarensis
NCBI taxonomy Id: 1232681
Other names: Aquiflexum sp. AK24, Aquiflexum sp. AK26, Cyclobacteriaceae bacterium AK24, JCM 18822, L. lonarensis, Lunatimonas lonarensis Srinivas et al. 2015, MTCC 11627, strain AK24
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