Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAL16282.1 | SAL38137.1 | AWB69_00839 | AWB69_03728 | Thioredoxin domain-containing protein. | Porin. | 0.790 |
SAL16282.1 | SAL40468.1 | AWB69_00839 | AWB69_04080 | Thioredoxin domain-containing protein. | Trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.894 |
SAL16282.1 | SAL51331.1 | AWB69_00839 | AWB69_05262 | Thioredoxin domain-containing protein. | Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.808 |
SAL16282.1 | SAL52636.1 | AWB69_00839 | AWB69_05468 | Thioredoxin domain-containing protein. | Porin protein. | 0.792 |
SAL16282.1 | SAL58943.1 | AWB69_00839 | AWB69_06504 | Thioredoxin domain-containing protein. | Porin. | 0.791 |
SAL16282.1 | SAL63233.1 | AWB69_00839 | AWB69_07088 | Thioredoxin domain-containing protein. | Glutamate synthase. | 0.799 |
SAL16282.1 | SAL64783.1 | AWB69_00839 | AWB69_07301 | Thioredoxin domain-containing protein. | Dihydrolipoamide dehydrogenase. | 0.872 |
SAL16282.1 | SAL67341.1 | AWB69_00839 | AWB69_07715 | Thioredoxin domain-containing protein. | Thioredoxin-disulfide reductase. | 0.915 |
SAL16282.1 | SAL69425.1 | AWB69_00839 | AWB69_08203 | Thioredoxin domain-containing protein. | FAD-dependent pyridine nucleotide-disulfide oxidoreductase. | 0.915 |
SAL16282.1 | SAL70341.1 | AWB69_00839 | AWB69_08327 | Thioredoxin domain-containing protein. | NADH:flavin oxidoreductase. | 0.796 |
SAL38137.1 | SAL16282.1 | AWB69_03728 | AWB69_00839 | Porin. | Thioredoxin domain-containing protein. | 0.790 |
SAL38137.1 | SAL52636.1 | AWB69_03728 | AWB69_05468 | Porin. | Porin protein. | 0.768 |
SAL40468.1 | SAL16282.1 | AWB69_04080 | AWB69_00839 | Trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Thioredoxin domain-containing protein. | 0.894 |
SAL40468.1 | SAL63233.1 | AWB69_04080 | AWB69_07088 | Trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glutamate synthase. | 0.799 |
SAL40468.1 | SAL64783.1 | AWB69_04080 | AWB69_07301 | Trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Dihydrolipoamide dehydrogenase. | 0.813 |
SAL40468.1 | SAL67341.1 | AWB69_04080 | AWB69_07715 | Trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Thioredoxin-disulfide reductase. | 0.740 |
SAL40468.1 | SAL69425.1 | AWB69_04080 | AWB69_08203 | Trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | FAD-dependent pyridine nucleotide-disulfide oxidoreductase. | 0.740 |
SAL51331.1 | SAL16282.1 | AWB69_05262 | AWB69_00839 | Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Thioredoxin domain-containing protein. | 0.808 |
SAL51331.1 | SAL63233.1 | AWB69_05262 | AWB69_07088 | Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Glutamate synthase. | 0.825 |
SAL51331.1 | SAL64783.1 | AWB69_05262 | AWB69_07301 | Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Dihydrolipoamide dehydrogenase. | 0.780 |
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