STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAL17631.1NADH:flavin oxidoreductase. (353 aa)    
Predicted Functional Partners:
SAL60273.1
Hypothetical protein.
 
      0.750
SAL63233.1
Glutamate synthase.
    
 0.697
SAL67940.1
Fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.653
SAL44342.1
Respiratory nitrate reductase subunit beta.
    
   0.601
SAL17635.1
ArsR family transcriptional regulator.
       0.594
SAL31066.1
Electron transfer flavoprotein alpha/beta-subunit.
   
 
 0.492
SAL34250.1
Electron transfer flavoprotein subunit beta.
   
 
 0.492
SAL52973.1
Electron transfer flavoprotein subunit beta.
   
 
 0.492
SAL62784.1
Electron transfer flavoprotein subunit beta.
   
 
 0.492
SAL71674.1
Electron transfer flavoprotein subunit beta.
   
 
 0.492
Your Current Organism:
Caballeronia udeis
NCBI taxonomy Id: 1232866
Other names: Burkholderia sp. LMG 27134, Burkholderia sp. LMG 27135, Burkholderia sp. R-20941, Burkholderia udeis, Burkholderia udeis Vandamme et al. 2013, C. udeis, CCUG 63061, Caballeronia udeis (Vandamme et al. 2013) Dobritsa and Samadpour 2016, LMG 27134, LMG:27134, Paraburkholderia udeis, strain Hg2
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