STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAL50744.1Hypothetical protein. (183 aa)    
Predicted Functional Partners:
SAL38670.1
Glycoside hydrolase family protein.
  
 
 0.851
SAL24304.1
Hypothetical protein.
 
     0.772
SAL47889.1
Hypothetical protein.
 
     0.770
SAL54145.1
Phosphoenolpyruvate--protein phosphotransferase; Belongs to the PEP-utilizing enzyme family.
    
 0.694
SAL31672.1
Hypothetical protein.
  
     0.499
SAL38798.1
Hopanoid biosynthesis associated protein HpnK.
 
  
 0.460
SAL31668.1
Squalene--hopene cyclase.
  
     0.433
SAL42473.1
Fatty acid hydroxylase.
  
     0.427
SAL50738.1
AMP-dependent synthetase/ligase.
       0.426
SAL54140.1
Phosphotransferase system, IIBC component.
   
  
 0.423
Your Current Organism:
Caballeronia udeis
NCBI taxonomy Id: 1232866
Other names: Burkholderia sp. LMG 27134, Burkholderia sp. LMG 27135, Burkholderia sp. R-20941, Burkholderia udeis, Burkholderia udeis Vandamme et al. 2013, C. udeis, CCUG 63061, Caballeronia udeis (Vandamme et al. 2013) Dobritsa and Samadpour 2016, LMG 27134, LMG:27134, Paraburkholderia udeis, strain Hg2
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