Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAL27421.1 | SAL32890.1 | AWB69_02102 | AWB69_02898 | Tetratricopeptide repeat protein. | Polyketide synthase. | 0.885 |
SAL27421.1 | SAL32898.1 | AWB69_02102 | AWB69_02899 | Tetratricopeptide repeat protein. | Polyketide synthase. | 0.885 |
SAL27421.1 | SAL32903.1 | AWB69_02102 | AWB69_02900 | Tetratricopeptide repeat protein. | Thiotemplate mechanism natural product synthetase. | 0.885 |
SAL27421.1 | SAL57129.1 | AWB69_02102 | AWB69_06190 | Tetratricopeptide repeat protein. | Short-chain dehydrogenase/reductase SDR. | 0.805 |
SAL27421.1 | SAL69149.1 | AWB69_02102 | AWB69_08154 | Tetratricopeptide repeat protein. | Cytochrome b/b6 domain-containing protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.444 |
SAL27421.1 | sbcD | AWB69_02102 | AWB69_03989 | Tetratricopeptide repeat protein. | Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.502 |
SAL31040.1 | SAL32890.1 | AWB69_02578 | AWB69_02898 | Choline-sulfatase. | Polyketide synthase. | 0.864 |
SAL31040.1 | SAL32898.1 | AWB69_02578 | AWB69_02899 | Choline-sulfatase. | Polyketide synthase. | 0.864 |
SAL31040.1 | SAL32903.1 | AWB69_02578 | AWB69_02900 | Choline-sulfatase. | Thiotemplate mechanism natural product synthetase. | 0.864 |
SAL31040.1 | SAL57129.1 | AWB69_02578 | AWB69_06190 | Choline-sulfatase. | Short-chain dehydrogenase/reductase SDR. | 0.841 |
SAL32890.1 | SAL27421.1 | AWB69_02898 | AWB69_02102 | Polyketide synthase. | Tetratricopeptide repeat protein. | 0.885 |
SAL32890.1 | SAL31040.1 | AWB69_02898 | AWB69_02578 | Polyketide synthase. | Choline-sulfatase. | 0.864 |
SAL32890.1 | SAL32898.1 | AWB69_02898 | AWB69_02899 | Polyketide synthase. | Polyketide synthase. | 0.994 |
SAL32890.1 | SAL32903.1 | AWB69_02898 | AWB69_02900 | Polyketide synthase. | Thiotemplate mechanism natural product synthetase. | 0.994 |
SAL32890.1 | SAL57121.1 | AWB69_02898 | AWB69_06189 | Polyketide synthase. | Short-chain dehydrogenase. | 0.904 |
SAL32890.1 | SAL57129.1 | AWB69_02898 | AWB69_06190 | Polyketide synthase. | Short-chain dehydrogenase/reductase SDR. | 0.807 |
SAL32890.1 | SAL68239.1 | AWB69_02898 | AWB69_07978 | Polyketide synthase. | Choline-sulfatase. | 0.864 |
SAL32890.1 | SAL69149.1 | AWB69_02898 | AWB69_08154 | Polyketide synthase. | Cytochrome b/b6 domain-containing protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.996 |
SAL32890.1 | SAL73120.1 | AWB69_02898 | AWB69_08925 | Polyketide synthase. | Choline-sulfatase. | 0.864 |
SAL32890.1 | sbcD | AWB69_02898 | AWB69_03989 | Polyketide synthase. | Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.864 |
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