STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAL67471.1Cobyrinic acid a,c-diamide synthase. (347 aa)    
Predicted Functional Partners:
SAL67474.1
parB-like partition proteins; Belongs to the ParB family.
 
 
 0.979
SAL40325.1
parB-like partition proteins; Belongs to the ParB family.
 
 
 0.889
SAL38565.1
Cobyrinic acid a,c-diamide synthase.
  
     0.762
SAL31382.1
parB-like partition proteins; Belongs to the ParB family.
 
 
 0.715
SAL67469.1
Initiator RepB protein.
 
     0.708
SAL69608.1
ParB, partition protein.
 
 
 0.688
SAL69581.1
Nuclease.
 
 
 0.684
SAL30698.1
TonB-dependent receptor, plug.
    
 
 0.682
SAL39023.1
TonB-dependent receptor.
    
 
 0.682
SAL50138.1
ParB, partition protein.
 
 
 0.677
Your Current Organism:
Caballeronia udeis
NCBI taxonomy Id: 1232866
Other names: Burkholderia sp. LMG 27134, Burkholderia sp. LMG 27135, Burkholderia sp. R-20941, Burkholderia udeis, Burkholderia udeis Vandamme et al. 2013, C. udeis, CCUG 63061, Caballeronia udeis (Vandamme et al. 2013) Dobritsa and Samadpour 2016, LMG 27134, LMG:27134, Paraburkholderia udeis, strain Hg2
Server load: low (22%) [HD]