STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK39576.13-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase. (317 aa)    
Predicted Functional Partners:
SEK42388.1
Tetratricopeptide repeat-containing protein.
  
     0.684
SEK42501.1
Hypothetical protein.
  
     0.683
SEL40837.1
Alginate export.
  
     0.670
SEK39531.1
Sugar-transfer associated ATP-grasp.
 
     0.666
SEL31001.1
NAD(P)-binding Rossmann-like domain-containing protein.
  
     0.654
SEL61062.1
Methyltransferase domain-containing protein.
  
     0.653
SEL66987.1
Hypothetical protein.
  
     0.646
SEL04426.1
Protein of unknown function.
  
     0.642
SEL24282.1
Cupin-like domain-containing protein.
 
     0.636
SEL26257.1
Cytochrome c, mono-and diheme variants.
  
     0.599
Your Current Organism:
Nitrosovibrio tenuis
NCBI taxonomy Id: 1233
Other names: N. tenuis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.