STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK45292.1Probable DNA repair protein. (947 aa)    
Predicted Functional Partners:
SEK45333.1
ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily.
 
 
 0.999
SEK45219.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.748
SEL23072.1
Osmotically inducible protein OsmC.
   
    0.739
SEL24115.1
Hypothetical protein.
  
     0.551
SEK45367.1
Membrane-bound lytic murein transglycosylase B.
       0.529
SEL05215.1
Putative copper resistance protein D.
 
     0.466
SEK68537.1
Hypothetical protein.
  
     0.444
SEL20410.1
Hypothetical protein.
  
     0.418
SEK45116.1
Alpha-amylase/alpha-mannosidase, GH57 family.
 
     0.408
Your Current Organism:
Nitrosovibrio tenuis
NCBI taxonomy Id: 1233
Other names: N. tenuis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.