STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK64774.1Concanavalin A-like lectin/glucanases superfamily protein. (509 aa)    
Predicted Functional Partners:
SEL61983.1
DNA translocase FtsK.
    
   0.855
SEK66824.1
Hypothetical protein.
  
 0.832
SEK64746.1
Hypothetical protein.
       0.773
SEK64805.1
Acetyltransferase (GNAT) family protein.
       0.773
SEK64844.1
Hypothetical protein.
       0.773
SEK64875.1
Hypothetical protein.
       0.773
SEL04081.1
Hypothetical protein.
    
   0.754
SEL33982.1
PEP-CTERM protein-sorting domain-containing protein.
   
 0.680
SEK64705.1
Hypothetical protein.
       0.658
SEL67240.1
HxxPF-repeated domain-containing protein.
  
 
 0.651
Your Current Organism:
Nitrosovibrio tenuis
NCBI taxonomy Id: 1233
Other names: N. tenuis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.