STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK68537.1Hypothetical protein. (127 aa)    
Predicted Functional Partners:
SEL35610.1
O-antigen ligase.
  
     0.635
SEK35314.1
Transglutaminase-like enzyme, putative cysteine protease.
  
     0.551
SEK68495.1
Hypothetical protein.
       0.522
SEL53758.1
4-oxalocrotonate tautomerase.
  
     0.484
SEK85702.1
ADP-ribosylglycohydrolase.
  
     0.455
SEK45292.1
Probable DNA repair protein.
  
     0.444
Your Current Organism:
Nitrosovibrio tenuis
NCBI taxonomy Id: 1233
Other names: N. tenuis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.