STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK88028.1Predicted lipid-binding transport protein, Tim44 family. (293 aa)    
Predicted Functional Partners:
SEK87990.1
Ubiquinone biosynthesis protein UbiJ.
       0.762
SEK35265.1
Ribosome-associated protein; Belongs to the UPF0307 family.
  
     0.536
SEK87958.1
2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.
       0.515
SEL44997.1
Intracellular septation protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
  
    0.500
SEK88066.1
Nucleotide-binding universal stress protein, UspA family.
 
     0.499
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.435
Your Current Organism:
Nitrosovibrio tenuis
NCBI taxonomy Id: 1233
Other names: N. tenuis
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