STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL01584.1Outer membrane transport energization protein ExbB. (550 aa)    
Predicted Functional Partners:
SEL01615.1
Outer membrane transport energization protein ExbD.
 
 
 0.983
SEL01657.1
Outer membrane transport energization protein TonB.
 
 
 0.975
SEL01689.1
Porin.
 
  
 0.916
SEL01439.1
Hemolysin activation/secretion protein.
 
  
 0.841
SEK98058.1
Cell division and transport-associated protein TolR.
 
 
 0.834
SEK90364.1
Outer membrane transport energization protein ExbD.
 
 
 0.829
SEL01497.1
Filamentous hemagglutinin family N-terminal domain-containing protein.
 
  
 0.808
SEK90441.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.797
SEK89644.1
Biopolymer transport protein ExbD.
 
 
 0.771
SEL19828.1
Protein TonB.
  
 
 0.750
Your Current Organism:
Nitrosovibrio tenuis
NCBI taxonomy Id: 1233
Other names: N. tenuis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.