Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEK57903.1 | SEK97610.1 | SAMN05216387_10269 | SAMN05216387_10446 | Hypothetical protein; Belongs to the UPF0125 (RnfH) family. | Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.824 |
| SEK57903.1 | atpE | SAMN05216387_10269 | SAMN05216387_10169 | Hypothetical protein; Belongs to the UPF0125 (RnfH) family. | F-type H+-transporting ATPase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.401 |
| SEK57903.1 | bamE | SAMN05216387_10269 | SAMN05216387_101177 | Hypothetical protein; Belongs to the UPF0125 (RnfH) family. | Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.452 |
| SEK84661.1 | SEK86728.1 | SAMN05216387_103185 | SAMN05216387_103244 | NADH dehydrogenase subunit E. | Urea carboxylase. | 0.719 |
| SEK84661.1 | SEK97610.1 | SAMN05216387_103185 | SAMN05216387_10446 | NADH dehydrogenase subunit E. | Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.575 |
| SEK84661.1 | SEL19295.1 | SAMN05216387_103185 | SAMN05216387_10675 | NADH dehydrogenase subunit E. | Dihydrolipoamide dehydrogenase. | 0.419 |
| SEK84661.1 | SEL47242.1 | SAMN05216387_103185 | SAMN05216387_11213 | NADH dehydrogenase subunit E. | NADH dehydrogenase subunit E. | 0.505 |
| SEK86728.1 | SEK84661.1 | SAMN05216387_103244 | SAMN05216387_103185 | Urea carboxylase. | NADH dehydrogenase subunit E. | 0.719 |
| SEK86728.1 | SEK97610.1 | SAMN05216387_103244 | SAMN05216387_10446 | Urea carboxylase. | Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.737 |
| SEK86728.1 | SEL19295.1 | SAMN05216387_103244 | SAMN05216387_10675 | Urea carboxylase. | Dihydrolipoamide dehydrogenase. | 0.999 |
| SEK86728.1 | SEL47242.1 | SAMN05216387_103244 | SAMN05216387_11213 | Urea carboxylase. | NADH dehydrogenase subunit E. | 0.719 |
| SEK97610.1 | SEK57903.1 | SAMN05216387_10446 | SAMN05216387_10269 | Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Hypothetical protein; Belongs to the UPF0125 (RnfH) family. | 0.824 |
| SEK97610.1 | SEK84661.1 | SAMN05216387_10446 | SAMN05216387_103185 | Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | NADH dehydrogenase subunit E. | 0.575 |
| SEK97610.1 | SEK86728.1 | SAMN05216387_10446 | SAMN05216387_103244 | Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Urea carboxylase. | 0.737 |
| SEK97610.1 | SEL10423.1 | SAMN05216387_10446 | SAMN05216387_10575 | Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Sulfide:quinone oxidoreductase. | 0.750 |
| SEK97610.1 | SEL19295.1 | SAMN05216387_10446 | SAMN05216387_10675 | Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Dihydrolipoamide dehydrogenase. | 0.691 |
| SEK97610.1 | SEL47242.1 | SAMN05216387_10446 | SAMN05216387_11213 | Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | NADH dehydrogenase subunit E. | 0.571 |
| SEK97610.1 | atpE | SAMN05216387_10446 | SAMN05216387_10169 | Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | F-type H+-transporting ATPase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.590 |
| SEK97610.1 | bamE | SAMN05216387_10446 | SAMN05216387_101177 | Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.576 |
| SEK97610.1 | nth | SAMN05216387_10446 | SAMN05216387_10445 | Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.744 |
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