rpmI protein (Nitrosovibrio tenuis) - STRING interaction network

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Score

rpmI

LSU ribosomal protein L35P; Belongs to the bacterial ribosomal protein bL35 family. (65 aa)

Predicted Functional Partners:

rplT

0.999

rpsP

0.998

rplW

0.998

rplX

0.998

rpsN

0.998

rpmJ

0.998

rpmF

0.998

rpsR

0.998

rpsF

0.998

rpmE

0.998

Your Current Organism:

Nitrosovibrio tenuis

NCBI taxonomy Id: 1233
Other names: N. tenuis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplT	rplW	SAMN05216387_10637	SAMN05216387_101519	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.997
rplT	rplX	SAMN05216387_10637	SAMN05216387_101528	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.998
rplT	rpmE	SAMN05216387_10637	SAMN05216387_11132	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	LSU ribosomal protein L31P; Binds the 23S rRNA.	0.998
rplT	rpmF	SAMN05216387_10637	SAMN05216387_103367	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.997
rplT	rpmI	SAMN05216387_10637	SAMN05216387_10636	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	LSU ribosomal protein L35P; Belongs to the bacterial ribosomal protein bL35 family.	0.999
rplT	rpmJ	SAMN05216387_10637	SAMN05216387_101539	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	0.997
rplT	rpsF	SAMN05216387_10637	SAMN05216387_11015	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.997
rplT	rpsN	SAMN05216387_10637	SAMN05216387_101530	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.998
rplT	rpsP	SAMN05216387_10637	SAMN05216387_101278	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.998
rplT	rpsR	SAMN05216387_10637	SAMN05216387_11013	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.998
rplW	rplT	SAMN05216387_101519	SAMN05216387_10637	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.997
rplW	rplX	SAMN05216387_101519	SAMN05216387_101528	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.999
rplW	rpmE	SAMN05216387_101519	SAMN05216387_11132	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	LSU ribosomal protein L31P; Binds the 23S rRNA.	0.992
rplW	rpmF	SAMN05216387_101519	SAMN05216387_103367	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.997
rplW	rpmI	SAMN05216387_101519	SAMN05216387_10636	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	LSU ribosomal protein L35P; Belongs to the bacterial ribosomal protein bL35 family.	0.998
rplW	rpmJ	SAMN05216387_101519	SAMN05216387_101539	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	0.998
rplW	rpsF	SAMN05216387_101519	SAMN05216387_11015	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.997
rplW	rpsN	SAMN05216387_101519	SAMN05216387_101530	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.999
rplW	rpsP	SAMN05216387_101519	SAMN05216387_101278	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.997
rplW	rpsR	SAMN05216387_101519	SAMN05216387_11013	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.997