STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL35792.12-deoxy-D-gluconate 3-dehydrogenase. (278 aa)    
Predicted Functional Partners:
SEL67240.1
HxxPF-repeated domain-containing protein.
  
 0.996
nuoC
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 
 0.962
SEL35838.1
Predicted dehydrogenase.
 
 
  0.926
SEL35872.1
N-acylneuraminate cytidylyltransferase.
 
   0.922
SEL54946.1
Amino acid adenylation domain-containing protein.
  
 0.891
SEK97009.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 0.858
SEL29561.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.850
SEL39023.1
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase.
     
 0.848
SEL27113.1
Thioredoxin reductase (NADPH).
   
 0.794
SEK57202.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
    
  0.770
Your Current Organism:
Nitrosovibrio tenuis
NCBI taxonomy Id: 1233
Other names: N. tenuis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.