STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL37312.1Putative ABC transport system permease protein. (403 aa)    
Predicted Functional Partners:
lolA
Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.920
SEL37412.1
Outer membrane lipoprotein-sorting protein.
 
 
 0.910
SEL37384.1
Putative ABC transport system ATP-binding protein.
 
  0.894
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
 
 0.852
SEK87030.1
Putative ABC transport system ATP-binding protein.
 
  0.802
SEL37288.1
Putative ABC transport system permease protein.
 
    
0.786
SEK29371.1
Putative ABC transport system ATP-binding protein.
 
  0.780
SEK85250.1
ABC-type lipoprotein export system, ATPase component.
 
 0.778
SEK66169.1
Putative ABC transport system ATP-binding protein.
  
 0.740
SEK66283.1
Putative ABC transport system ATP-binding protein.
  
 0.740
Your Current Organism:
Nitrosovibrio tenuis
NCBI taxonomy Id: 1233
Other names: N. tenuis
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