STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppkUnannotated protein; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. (689 aa)    
Predicted Functional Partners:
O23A_p1894
Unannotated protein.
 
  
 0.982
O23A_p0715
Unannotated protein; Belongs to the GppA/Ppx family.
 
  
 0.968
ppa
Unannotated protein; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
     
 0.958
gppA
Unannotated protein; Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with ppGpp controls the 'stringent response', an adaptive process that allows bacteria to respond to amino acid starvation, resulting in the coordinated regulation of numerous cellular activities.
 
  
 0.836
GCA_000315855_04125
Unannotated protein.
 
  
 0.754
O23A_p4347
Unannotated protein.
  
  
 0.711
polA
Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.661
O23A_p0717
Unannotated protein.
       0.620
pstA
Unannotated protein.
     
 0.483
rpmI
Unannotated protein; Belongs to the bacterial ribosomal protein bL35 family.
   
   0.445
Your Current Organism:
Aeromonas salmonicida achromogenes
NCBI taxonomy Id: 1233098
Other names: A. salmonicida subsp. achromogenes AS03, Aeromonas salmonicida subsp. achromogenes AS03
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.