STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000315855_02860Unannotated protein. (136 aa)    
Predicted Functional Partners:
GCA_000315855_05100
Unannotated protein.
  
     0.556
GCA_000315855_02947
Unannotated protein.
  
     0.554
GCA_000315855_03573
Unannotated protein.
  
     0.545
GCA_000315855_04626
Unannotated protein.
  
     0.496
GCA_000315855_01616
Unannotated protein.
  
     0.487
GCA_000315855_01904
Unannotated protein.
  
     0.486
GCA_000315855_02355
Unannotated protein.
  
     0.484
GCA_000315855_03028
Unannotated protein.
  
     0.471
GCA_000315855_03233
Unannotated protein.
  
     0.467
GCA_000315855_01233
Unannotated protein.
  
     0.463
Your Current Organism:
Aeromonas salmonicida achromogenes
NCBI taxonomy Id: 1233098
Other names: A. salmonicida subsp. achromogenes AS03, Aeromonas salmonicida subsp. achromogenes AS03
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.