STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC36872.1ABC-2 type transport system ATP-binding protein. (245 aa)    
Predicted Functional Partners:
SKC36883.1
ABC-2 family transporter protein.
 
     0.873
SKC44130.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
   
 
0.864
SKC36876.1
Hypothetical protein.
 
     0.856
SKC59892.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
   
 
0.764
SKC44519.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
   
  0.741
SKC35049.1
Glycine betaine/proline transport system ATP-binding protein.
 
     
0.710
SKC68697.1
ABC-type lipoprotein export system, ATPase component.
 
  
  0.637
SKC68242.1
ABC-2 type transport system permease protein.
     0.602
SKC36868.1
Signal transduction histidine kinase.
  
    0.586
SKC36871.1
Two component transcriptional regulator, LuxR family.
       0.584
Your Current Organism:
Okibacterium fritillariae
NCBI taxonomy Id: 123320
Other names: Curtibacterium sp. VKM Ac-2059, Curtibacterium sp. VKM Ac-2062, Curtobacterium sp. VKM Ac-2059, Curtobacterium sp. VKM Ac-2062, IFO 16404, JCM 12284, NBRC 16404, O. fritillariae, Okibacterium fritillariae Evtushenko et al. 2002, VKM Ac-2059
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.