STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC37459.1Carbohydrate ABC transporter membrane protein 1, CUT1 family; Non-canonical start codon; manually curated. (268 aa)    
Predicted Functional Partners:
SKC37454.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.981
SKC43199.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
  0.953
SKC37463.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.932
SKC67922.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.917
SKC37745.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.914
SKC69437.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.905
SKC69284.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.902
SKC54163.1
Xylobiose ABC transporter membrane protein.
 
  0.898
SKC37491.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.897
SKC36991.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.896
Your Current Organism:
Okibacterium fritillariae
NCBI taxonomy Id: 123320
Other names: Curtibacterium sp. VKM Ac-2059, Curtibacterium sp. VKM Ac-2062, Curtobacterium sp. VKM Ac-2059, Curtobacterium sp. VKM Ac-2062, IFO 16404, JCM 12284, NBRC 16404, O. fritillariae, Okibacterium fritillariae Evtushenko et al. 2002, VKM Ac-2059
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