Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKC36214.1 | SKC37954.1 | SAMN06309945_0166 | SAMN06309945_0392 | Gluconokinase. | Sugar (pentulose or hexulose) kinase. | 0.832 |
SKC36214.1 | SKC39570.1 | SAMN06309945_0166 | SAMN06309945_0563 | Gluconokinase. | H+/gluconate symporter. | 0.477 |
SKC37954.1 | SKC36214.1 | SAMN06309945_0392 | SAMN06309945_0166 | Sugar (pentulose or hexulose) kinase. | Gluconokinase. | 0.832 |
SKC37954.1 | SKC39570.1 | SAMN06309945_0392 | SAMN06309945_0563 | Sugar (pentulose or hexulose) kinase. | H+/gluconate symporter. | 0.406 |
SKC37954.1 | SKC53210.1 | SAMN06309945_0392 | SAMN06309945_1749 | Sugar (pentulose or hexulose) kinase. | PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family. | 0.433 |
SKC39526.1 | SKC39542.1 | SAMN06309945_0561 | SAMN06309945_0562 | hydroxymethylglutaryl-CoA lyase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | formyl-CoA transferase; Belongs to the CoA-transferase III family. | 0.939 |
SKC39526.1 | SKC39570.1 | SAMN06309945_0561 | SAMN06309945_0563 | hydroxymethylglutaryl-CoA lyase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | H+/gluconate symporter. | 0.664 |
SKC39526.1 | SKC39578.1 | SAMN06309945_0561 | SAMN06309945_0564 | hydroxymethylglutaryl-CoA lyase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | Regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family. | 0.400 |
SKC39542.1 | SKC39526.1 | SAMN06309945_0562 | SAMN06309945_0561 | formyl-CoA transferase; Belongs to the CoA-transferase III family. | hydroxymethylglutaryl-CoA lyase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.939 |
SKC39542.1 | SKC39570.1 | SAMN06309945_0562 | SAMN06309945_0563 | formyl-CoA transferase; Belongs to the CoA-transferase III family. | H+/gluconate symporter. | 0.661 |
SKC39542.1 | SKC39578.1 | SAMN06309945_0562 | SAMN06309945_0564 | formyl-CoA transferase; Belongs to the CoA-transferase III family. | Regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family. | 0.400 |
SKC39570.1 | SKC36214.1 | SAMN06309945_0563 | SAMN06309945_0166 | H+/gluconate symporter. | Gluconokinase. | 0.477 |
SKC39570.1 | SKC37954.1 | SAMN06309945_0563 | SAMN06309945_0392 | H+/gluconate symporter. | Sugar (pentulose or hexulose) kinase. | 0.406 |
SKC39570.1 | SKC39526.1 | SAMN06309945_0563 | SAMN06309945_0561 | H+/gluconate symporter. | hydroxymethylglutaryl-CoA lyase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.664 |
SKC39570.1 | SKC39542.1 | SAMN06309945_0563 | SAMN06309945_0562 | H+/gluconate symporter. | formyl-CoA transferase; Belongs to the CoA-transferase III family. | 0.661 |
SKC39570.1 | SKC39578.1 | SAMN06309945_0563 | SAMN06309945_0564 | H+/gluconate symporter. | Regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family. | 0.456 |
SKC39570.1 | SKC53210.1 | SAMN06309945_0563 | SAMN06309945_1749 | H+/gluconate symporter. | PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family. | 0.407 |
SKC39578.1 | SKC39526.1 | SAMN06309945_0564 | SAMN06309945_0561 | Regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family. | hydroxymethylglutaryl-CoA lyase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.400 |
SKC39578.1 | SKC39542.1 | SAMN06309945_0564 | SAMN06309945_0562 | Regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family. | formyl-CoA transferase; Belongs to the CoA-transferase III family. | 0.400 |
SKC39578.1 | SKC39570.1 | SAMN06309945_0564 | SAMN06309945_0563 | Regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family. | H+/gluconate symporter. | 0.456 |
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