STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC48600.1Phosphatidate phosphatase APP1. (355 aa)    
Predicted Functional Partners:
SKC48615.1
Membrane protein DedA, SNARE-associated domain.
      0.964
SKC48539.1
Aromatic acid exporter family member 1.
 
     0.614
SKC47639.1
Energy-coupling factor transport system permease protein.
  
     0.520
SKC42199.1
ABC-2 type transport system permease protein.
  
     0.509
SKC45801.1
ABC-2 type transport system permease protein.
  
     0.474
SKC48628.1
Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein.
       0.464
SKC48637.1
Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein.
       0.433
SKC48645.1
ATP-binding cassette, subfamily C, CydD.
       0.428
SKC48681.1
ATP-binding cassette, subfamily C, CydC.
       0.428
SKC47613.1
Energy-coupling factor transport system substrate-specific component.
  
     0.425
Your Current Organism:
Okibacterium fritillariae
NCBI taxonomy Id: 123320
Other names: Curtibacterium sp. VKM Ac-2059, Curtibacterium sp. VKM Ac-2062, Curtobacterium sp. VKM Ac-2059, Curtobacterium sp. VKM Ac-2062, IFO 16404, JCM 12284, NBRC 16404, O. fritillariae, Okibacterium fritillariae Evtushenko et al. 2002, VKM Ac-2059
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.