STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC54436.1FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. (439 aa)    
Predicted Functional Partners:
SKC54444.1
O-acetylhomoserine sulfhydrylase.
       0.773
SKC43905.1
FMN reductase.
 
  0.735
SKC68307.1
FMNH2-dependent dimethyl sulfone monooxygenase.
  
    0.719
SKC68858.1
Sulfonate transport system substrate-binding protein.
 
 
  0.713
SKC44387.1
Acyl-CoA dehydrogenase.
 
    0.710
SKC35329.1
FMN reductase.
 
  0.706
SKC68861.1
Sulfonate transport system permease protein.
 
  0.618
SKC68854.1
Sulfonate transport system ATP-binding protein.
 
  0.559
SKC54460.1
Predicted arabinose efflux permease, MFS family.
       0.468
SKC36658.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
 
 0.461
Your Current Organism:
Okibacterium fritillariae
NCBI taxonomy Id: 123320
Other names: Curtibacterium sp. VKM Ac-2059, Curtibacterium sp. VKM Ac-2062, Curtobacterium sp. VKM Ac-2059, Curtobacterium sp. VKM Ac-2062, IFO 16404, JCM 12284, NBRC 16404, O. fritillariae, Okibacterium fritillariae Evtushenko et al. 2002, VKM Ac-2059
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