STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC59116.1Transglutaminase-like superfamily protein. (999 aa)    
Predicted Functional Partners:
SKC59104.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
    0.956
SKC59128.1
FHA domain-containing protein.
 
     0.940
SKC59082.1
Hypothetical protein.
 
     0.914
SKC59058.1
FHA domain-containing protein.
 
     0.890
SKC59074.1
Hypothetical protein.
 
     0.882
SKC59091.1
MoxR-like ATPase.
 
     0.836
SKC62319.1
Protein of unknown function DUF58.
 
    0.811
SKC59067.1
Serine/threonine protein kinase.
 
     0.809
SKC62288.1
Hypothetical protein.
 
     0.799
SKC62272.1
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr.
 
     0.771
Your Current Organism:
Okibacterium fritillariae
NCBI taxonomy Id: 123320
Other names: Curtibacterium sp. VKM Ac-2059, Curtibacterium sp. VKM Ac-2062, Curtobacterium sp. VKM Ac-2059, Curtobacterium sp. VKM Ac-2062, IFO 16404, JCM 12284, NBRC 16404, O. fritillariae, Okibacterium fritillariae Evtushenko et al. 2002, VKM Ac-2059
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.