Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKC35744.1 | SKC35767.1 | SAMN06309945_0105 | SAMN06309945_0108 | Phosphocarrier protein. | PTS system, beta-glucosides-specific IIC component. | 0.991 |
SKC35744.1 | SKC52467.1 | SAMN06309945_0105 | SAMN06309945_1682 | Phosphocarrier protein. | PTS hybrid protein. | 0.450 |
SKC35744.1 | SKC53210.1 | SAMN06309945_0105 | SAMN06309945_1749 | Phosphocarrier protein. | PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family. | 0.972 |
SKC35744.1 | SKC59485.1 | SAMN06309945_0105 | SAMN06309945_1969 | Phosphocarrier protein. | Transcriptional antiterminator, BglG family. | 0.858 |
SKC35744.1 | SKC59497.1 | SAMN06309945_0105 | SAMN06309945_1970 | Phosphocarrier protein. | PTS system, cellobiose-specific IIB component. | 0.598 |
SKC35744.1 | SKC59507.1 | SAMN06309945_0105 | SAMN06309945_1972 | Phosphocarrier protein. | Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). | 0.934 |
SKC35744.1 | SKC59515.1 | SAMN06309945_0105 | SAMN06309945_1973 | Phosphocarrier protein. | PTS system, mannitol-specific IIC component. | 0.772 |
SKC35744.1 | SKC59534.1 | SAMN06309945_0105 | SAMN06309945_1974 | Phosphocarrier protein. | PTS system D-mannitol-specific IIA component, Fru family. | 0.765 |
SKC35767.1 | SKC35744.1 | SAMN06309945_0108 | SAMN06309945_0105 | PTS system, beta-glucosides-specific IIC component. | Phosphocarrier protein. | 0.991 |
SKC35767.1 | SKC52467.1 | SAMN06309945_0108 | SAMN06309945_1682 | PTS system, beta-glucosides-specific IIC component. | PTS hybrid protein. | 0.992 |
SKC35767.1 | SKC53195.1 | SAMN06309945_0108 | SAMN06309945_1747 | PTS system, beta-glucosides-specific IIC component. | Phosphocarrier protein HPr. | 0.976 |
SKC35767.1 | SKC53210.1 | SAMN06309945_0108 | SAMN06309945_1749 | PTS system, beta-glucosides-specific IIC component. | PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family. | 0.998 |
SKC35767.1 | SKC59485.1 | SAMN06309945_0108 | SAMN06309945_1969 | PTS system, beta-glucosides-specific IIC component. | Transcriptional antiterminator, BglG family. | 0.996 |
SKC35767.1 | SKC59497.1 | SAMN06309945_0108 | SAMN06309945_1970 | PTS system, beta-glucosides-specific IIC component. | PTS system, cellobiose-specific IIB component. | 0.794 |
SKC35767.1 | SKC59501.1 | SAMN06309945_0108 | SAMN06309945_1971 | PTS system, beta-glucosides-specific IIC component. | Phosphocarrier protein HPr. | 0.976 |
SKC35767.1 | SKC59507.1 | SAMN06309945_0108 | SAMN06309945_1972 | PTS system, beta-glucosides-specific IIC component. | Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). | 0.998 |
SKC35767.1 | SKC59515.1 | SAMN06309945_0108 | SAMN06309945_1973 | PTS system, beta-glucosides-specific IIC component. | PTS system, mannitol-specific IIC component. | 0.797 |
SKC35767.1 | SKC59534.1 | SAMN06309945_0108 | SAMN06309945_1974 | PTS system, beta-glucosides-specific IIC component. | PTS system D-mannitol-specific IIA component, Fru family. | 0.981 |
SKC52467.1 | SKC35744.1 | SAMN06309945_1682 | SAMN06309945_0105 | PTS hybrid protein. | Phosphocarrier protein. | 0.450 |
SKC52467.1 | SKC35767.1 | SAMN06309945_1682 | SAMN06309945_0108 | PTS hybrid protein. | PTS system, beta-glucosides-specific IIC component. | 0.992 |
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