STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC60376.1Lysophospholipase L1. (238 aa)    
Predicted Functional Partners:
mqo
Malate dehydrogenase (quinone).
       0.773
SKC60364.1
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
  
  0.771
SKC46296.1
Uncharacterized membrane protein.
  
     0.659
SKC44655.1
Hypothetical protein.
  
 
  0.616
SKC40802.1
Glutaredoxin.
  
     0.613
SKC59082.1
Hypothetical protein.
  
 
  0.568
SKC63232.1
Hypothetical protein; Manually curated.
  
     0.526
SKC39014.1
Hypothetical protein.
   
  0.493
SKC40035.1
MT0933-like antitoxin protein.
   
  0.493
SKC46042.1
Polysaccharide deacetylase.
   
  0.493
Your Current Organism:
Okibacterium fritillariae
NCBI taxonomy Id: 123320
Other names: Curtibacterium sp. VKM Ac-2059, Curtibacterium sp. VKM Ac-2062, Curtobacterium sp. VKM Ac-2059, Curtobacterium sp. VKM Ac-2062, IFO 16404, JCM 12284, NBRC 16404, O. fritillariae, Okibacterium fritillariae Evtushenko et al. 2002, VKM Ac-2059
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.