STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC62438.1Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. (432 aa)    
Predicted Functional Partners:
SKC62401.1
Nucleoside ABC transporter ATP-binding protein.
 
 0.998
SKC62391.1
Nucleoside-binding protein.
 
 
 0.992
SKC62424.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.978
SKC62446.1
Cytidine deaminase.
 
    0.824
SKC62448.1
Thymidine phosphorylase.
       0.780
SKC62461.1
Adenosine deaminase.
       0.722
SKC39780.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
  
  0.647
rbsA
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  
  0.633
SKC39876.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
  
  0.621
SKC62474.1
PTS system IIA component, L-Asc family.
       0.524
Your Current Organism:
Okibacterium fritillariae
NCBI taxonomy Id: 123320
Other names: Curtibacterium sp. VKM Ac-2059, Curtibacterium sp. VKM Ac-2062, Curtobacterium sp. VKM Ac-2059, Curtobacterium sp. VKM Ac-2062, IFO 16404, JCM 12284, NBRC 16404, O. fritillariae, Okibacterium fritillariae Evtushenko et al. 2002, VKM Ac-2059
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.