STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC63596.1Probable oxidoreductase, LLM family. (348 aa)    
Predicted Functional Partners:
SKC43905.1
FMN reductase.
  0.867
SKC35329.1
FMN reductase.
  0.707
SKC68858.1
Sulfonate transport system substrate-binding protein.
  
 
  0.612
SKC68854.1
Sulfonate transport system ATP-binding protein.
  
 
 0.606
SKC68861.1
Sulfonate transport system permease protein.
   
 
  0.590
SKC63605.1
NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains.
       0.524
SKC68323.1
Catechol 2,3-dioxygenase.
 
    0.490
Your Current Organism:
Okibacterium fritillariae
NCBI taxonomy Id: 123320
Other names: Curtibacterium sp. VKM Ac-2059, Curtibacterium sp. VKM Ac-2062, Curtobacterium sp. VKM Ac-2059, Curtobacterium sp. VKM Ac-2062, IFO 16404, JCM 12284, NBRC 16404, O. fritillariae, Okibacterium fritillariae Evtushenko et al. 2002, VKM Ac-2059
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.