Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKC41540.1 | SKC64697.1 | SAMN06309945_0746 | SAMN06309945_2397 | GAF sensor signal transduction histidine kinase. | Osmotically inducible protein OsmC. | 0.467 |
SKC46226.1 | SKC64697.1 | SAMN06309945_1202 | SAMN06309945_2397 | Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | Osmotically inducible protein OsmC. | 0.640 |
SKC64688.1 | SKC64697.1 | SAMN06309945_2396 | SAMN06309945_2397 | Hypothetical protein. | Osmotically inducible protein OsmC. | 0.795 |
SKC64688.1 | dapA | SAMN06309945_2396 | SAMN06309945_2399 | Hypothetical protein. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.412 |
SKC64688.1 | thyX | SAMN06309945_2396 | SAMN06309945_2398 | Hypothetical protein. | Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.550 |
SKC64697.1 | SKC41540.1 | SAMN06309945_2397 | SAMN06309945_0746 | Osmotically inducible protein OsmC. | GAF sensor signal transduction histidine kinase. | 0.467 |
SKC64697.1 | SKC46226.1 | SAMN06309945_2397 | SAMN06309945_1202 | Osmotically inducible protein OsmC. | Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | 0.640 |
SKC64697.1 | SKC64688.1 | SAMN06309945_2397 | SAMN06309945_2396 | Osmotically inducible protein OsmC. | Hypothetical protein. | 0.795 |
SKC64697.1 | dapA | SAMN06309945_2397 | SAMN06309945_2399 | Osmotically inducible protein OsmC. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.412 |
SKC64697.1 | thyX | SAMN06309945_2397 | SAMN06309945_2398 | Osmotically inducible protein OsmC. | Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.616 |
dapA | SKC64688.1 | SAMN06309945_2399 | SAMN06309945_2396 | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | Hypothetical protein. | 0.412 |
dapA | SKC64697.1 | SAMN06309945_2399 | SAMN06309945_2397 | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | Osmotically inducible protein OsmC. | 0.412 |
dapA | thyX | SAMN06309945_2399 | SAMN06309945_2398 | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.621 |
thyX | SKC64688.1 | SAMN06309945_2398 | SAMN06309945_2396 | Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | Hypothetical protein. | 0.550 |
thyX | SKC64697.1 | SAMN06309945_2398 | SAMN06309945_2397 | Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | Osmotically inducible protein OsmC. | 0.616 |
thyX | dapA | SAMN06309945_2398 | SAMN06309945_2399 | Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.621 |